Chromatin Immunoprecipitation (ChIP)

General Methods & Techniques




Kadota M, Yang HH, Hu N, Wang C, Hu Y, Taylor PR, Buetow KH, Lee MP.

Allele-specific chromatin immunoprecipitation studies show genetic influence on chromatin state in human genome.
PLoS Genet. 2007 May 18;3(5):e81.
PMID: 17511522 [PubMed - in process]


Dahl JA, Collas P.

Q2ChIP, a quick and quantitative chromatin immunoprecipitation assay, unravels epigenetic dynamics of developmentally regulated genes in human carcinoma cells.
Stem Cells. 2007 Apr;25(4):1037-46. Epub 2007 Feb 1.
PMID: 17272500 [PubMed - in process]


Kohzaki H, Murakami Y.

Faster and easier chromatin immunoprecipitation assay with high sensitivity.
Proteomics. 2007 Jan;7(1):10-4.
PMID: 17152093 [PubMed - indexed for MEDLINE]


Lee TI, Johnstone SE, Young RA.

Chromatin immunoprecipitation and microarray-based analysis of protein location.
Nat Protoc. 2006;1(2):729-48.
PMID: 17406303 [PubMed - in process]


Nelson JD, Denisenko O, Bomsztyk K.

Protocol for the fast chromatin immunoprecipitation (ChIP) method.
Nat Protoc. 2006;1(1):179-85.
PMID: 17406230 [PubMed - in process]


Szekvolgyi L, Balint BL, Imre L, Goda K, Szabo M, Nagy L, Szabo G.

Chip-on-beads: flow-cytometric evaluation of chromatin immunoprecipitation.
Cytometry A. 2006 Oct 1;69(10):1086-91.
PMID: 16998871 [PubMed - indexed for MEDLINE]


van Werven FJ, Timmers HT.

The use of biotin tagging in Saccharomyces cerevisiae improves the sensitivity of chromatin immunoprecipitation.
Nucleic Acids Res. 2006 Feb 25;34(4):e33.
PMID: 16500888 [PubMed - indexed for MEDLINE]


Nelson JD, Denisenko O, Sova P, Bomsztyk K.

Fast chromatin immunoprecipitation assay.
Nucleic Acids Res. 2006 Jan 5;34(1):e2.
PMID: 16397291 [PubMed - indexed for MEDLINE]


Le Guezennec X, Brinkman AB, Vermeulen M, Denissov SG, Gazziola C, Lohrum ME, Stunnenberg HG.

Targeted discovery tools: proteomics and chromatin immunoprecipitation-on-chip.
BJU Int. 2005 Dec;96 Suppl 2:16-22. Review.
PMID: 16359434 [PubMed - indexed for MEDLINE]


Das PM, Ramachandran K, vanWert J, Singal R.

Chromatin immunoprecipitation assay.
Biotechniques. 2004 Dec;37(6):961-9. Review.
PMID: 15597545 [PubMed - indexed for MEDLINE]


Geisberg JV, Struhl K.

Quantitative sequential chromatin immunoprecipitation, a method for analyzing co-occupancy of proteins at genomic regions in vivo.
Nucleic Acids Res. 2004 Nov 1;32(19):e151.
PMID: 15520460 [PubMed - indexed for MEDLINE]


Thorne AW, Myers FA, Hebbes TR.

Native chromatin immunoprecipitation.
Methods Mol Biol. 2004;287:21-44.
PMID: 15273401 [PubMed - indexed for MEDLINE]


Yan Y, Chen H, Costa M.

Chromatin immunoprecipitation assays.
Methods Mol Biol. 2004;287:9-19.
PMID: 15273400 [PubMed - indexed for MEDLINE]


Sandoval J, Rodriguez JL, Tur G, Serviddio G, Pereda J, Boukaba A, Sastre J, Torres L, Franco L, Lopez-Rodas G.

RNAPol-ChIP: a novel application of chromatin immunoprecipitation to the analysis of real-time gene transcription.
Nucleic Acids Res. 2004 Jun 24;32(11):e88. Print 2004.
PMID: 15247321 [PubMed - indexed for MEDLINE]


Buck MJ, Lieb JD.

ChIP-chip: considerations for the design, analysis, and application of genome-wide chromatin immunoprecipitation experiments.
Genomics. 2004 Mar;83(3):349-60. Review.
PMID: 14986705 [PubMed - indexed for MEDLINE]


Viens A, Mechold U, Lehrmann H, Harel-Bellan A, Ogryzko V.

Use of protein biotinylation in vivo for chromatin immunoprecipitation.
Anal Biochem. 2004 Feb 1;325(1):68-76.
PMID: 14715286 [PubMed - indexed for MEDLINE]


O'Neill LP, Turner BM.

Immunoprecipitation of native chromatin: NChIP.
Methods. 2003 Sep;31(1):76-82.
PMID: 12893176 [PubMed - indexed for MEDLINE]


Spencer VA, Sun JM, Li L, Davie JR.

Chromatin immunoprecipitation: a tool for studying histone acetylation and transcription factor binding.
Methods. 2003 Sep;31(1):67-75.
PMID: 12893175 [PubMed - indexed for MEDLINE]